Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC095055.1-201ENST00000603472 1113 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 AC245297.2-201ENST00000610119 565 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 AC007786.3-201ENST00000615154 596 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 AC006338.2-201ENST00000616864 791 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 AC011815.2-201ENST00000618230 2021 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.29□□□□□ -1.4
CNOT4O95628 AL603755.1-201ENST00000619504 163 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.29□□□□□ -1.4
CNOT4O95628 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CNOT4O95628 AC073869.7-201ENST00000640874 297 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 CASC19-212ENST00000641153 1287 ntBASIC6.29□□□□□ -1.4
CNOT4O95628 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CNOT4O95628 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
CNOT4O95628 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.29□□□□□ -1.4
CNOT4O95628 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.29□□□□□ -1.4
CNOT4O95628 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.29□□□□□ -1.4
CNOT4O95628 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNOT4O95628 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CNOT4O95628 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.28□□□□□ -1.4
CNOT4O95628 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 RN7SKP254-201ENST00000410685 310 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC093084.1-201ENST00000424233 687 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.28□□□□□ -1.4
CNOT4O95628 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CNOT4O95628 PUDPP2-201ENST00000431423 643 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 HMGB3P10-201ENST00000434734 572 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.28□□□□□ -1.4
CNOT4O95628 RPL23AP23-201ENST00000452590 471 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.28□□□□□ -1.4
CNOT4O95628 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 RN7SL836P-201ENST00000476140 296 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 AC021087.2-201ENST00000504656 1203 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC034244.1-201ENST00000507687 207 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC093752.1-206ENST00000511823 336 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC096661.1-201ENST00000515870 822 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 RNA5SP116-201ENST00000516132 98 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC107952.1-201ENST00000524200 376 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC004923.2-201ENST00000529649 369 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.28□□□□□ -1.4
CNOT4O95628 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 AC023161.2-201ENST00000551218 780 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AL358913.1-201ENST00000554342 121 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 RN7SL32P-201ENST00000580514 281 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC005034.4-201ENST00000603612 899 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AC245407.2-201ENST00000614199 451 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 WT1-AS_8.1-201ENST00000615200 275 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 AC026108.1-201ENST00000635444 547 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 AL596275.2-203ENST00000641951 371 ntBASIC6.28□□□□□ -1.4
CNOT4O95628 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.28□□□□□ -1.4
CNOT4O95628 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
CNOT4O95628 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNOT4O95628 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms