Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL390726.5-202ENST00000564800 256 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM1O00151 MIR4732-201ENST00000581873 76 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 MIR212-201ENST00000586026 110 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AL589863.1-201ENST00000595383 631 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AC004805.3-201ENST00000603178 310 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM1O00151 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 SAMMSON-213ENST00000641336 1521 ntBASIC5.78□□□□□ -1.48
PDLIM1O00151 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM1O00151 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM1O00151 AL353743.3-201ENST00000442109 1468 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.77□□□□□ -1.49
PDLIM1O00151 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 RN7SKP146-201ENST00000410242 334 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 NPM1P40-201ENST00000412758 733 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AL157884.1-201ENST00000424561 454 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC083862.1-201ENST00000427378 1242 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AL136455.1-201ENST00000441083 1240 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM1O00151 TCEA1P3-201ENST00000443005 880 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 SEPT7P3-201ENST00000455017 621 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC099670.1-201ENST00000455141 783 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 RN7SL197P-201ENST00000466981 299 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 RN7SL413P-201ENST00000482700 297 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM1O00151 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC093664.1-201ENST00000511779 289 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.77□□□□□ -1.49
PDLIM1O00151 RPA2P3-201ENST00000533268 770 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.77□□□□□ -1.49
PDLIM1O00151 RPL41P2-201ENST00000544920 409 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC025283.1-201ENST00000572039 734 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC233702.9-201ENST00000581528 203 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 MIR4472-2-201ENST00000582069 67 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AC060780.2-201ENST00000589047 198 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 AC244100.4-201ENST00000617747 388 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 MIR6823-201ENST00000622118 61 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 AL512356.3-201ENST00000623005 461 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
PDLIM1O00151 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 THAP12P5-201ENST00000405864 2275 ntBASIC5.77□□□□□ -1.49
PDLIM1O00151 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM1O00151 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
PDLIM1O00151 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM1O00151 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC133552.1-201ENST00000569988 4007 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 AC011755.1-201ENST00000623763 2049 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM1O00151 SNORD35A-201ENST00000363389 86 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM1O00151 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.76□□□□□ -1.49
PDLIM1O00151 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.76□□□□□ -1.49
PDLIM1O00151 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.76□□□□□ -1.49
PDLIM1O00151 AL645939.3-201ENST00000435408 225 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 ARMC4P1-201ENST00000438905 707 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 AC073072.2-201ENST00000447425 348 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 RPS18P1-201ENST00000447840 458 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 CBX1P2-201ENST00000453841 458 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM1O00151 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PDLIM1O00151 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.76□□□□□ -1.49
PDLIM1O00151 TOMM22P4-201ENST00000511318 336 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.76□□□□□ -1.49
PDLIM1O00151 BTG1P1-201ENST00000540396 508 ntBASIC5.76□□□□□ -1.49
PDLIM1O00151 AC244502.2-201ENST00000543361 851 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms