Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MIR4420-201ENST00000583944 77 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AL138960.1-201ENST00000613838 513 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC026124.2-201ENST00000621847 656 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 FO681491.1-202ENST00000623392 737 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC022726.2-201ENST00000634673 547 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC138627.1-204ENST00000641894 765 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA2E9PIF3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.59□□□□□ -1.52
NPIPA2E9PIF3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA2E9PIF3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 RN7SKP78-201ENST00000364711 318 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 SUGT1P2-201ENST00000379452 992 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 LYPLA1P3-201ENST00000402650 695 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC016908.1-201ENST00000442571 1219 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AL022237.1-201ENST00000446663 358 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC103563.5-201ENST00000455643 364 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 ACA64.1-201ENST00000459171 127 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC084754.1-201ENST00000463466 464 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 OR2A3P-201ENST00000493774 953 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 SUMO2P4-201ENST00000504193 276 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC138409.2-202ENST00000507274 458 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 OR5H7P-201ENST00000514084 930 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 IGLVIV-64-201ENST00000518581 301 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC021269.1-201ENST00000526860 705 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AP001858.2-201ENST00000536213 601 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC007956.1-201ENST00000555623 542 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC008521.2-201ENST00000591021 259 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC068768.2-201ENST00000602352 343 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC245014.3-201ENST00000618589 347 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC116667.2-201ENST00000641075 823 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AC092724.1-201ENST00000624623 3397 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 MIPEPP2-201ENST00000422560 1819 ntBASIC5.58□□□□□ -1.52
NPIPA2E9PIF3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AC008627.1-201ENST00000517511 1704 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AC005261.6-201ENST00000623072 1387 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 CR383656.5-201ENST00000547616 1340 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 OR11H13P-201ENST00000359695 979 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 SNORA70H-201ENST00000383910 135 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 SNORA70J-201ENST00000384182 135 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 NAP1L4P2-201ENST00000425958 899 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 SEPT14P12-201ENST00000442280 560 ntBASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA2E9PIF3 SNRPCP3-201ENST00000474888 476 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms