Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 BX276092.6-201ENST00000430476 250 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC009518.3-201ENST00000438972 253 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 RPL7AP71-201ENST00000451120 739 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 VPS25P1-201ENST00000455691 508 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 BX276092.8-201ENST00000455722 250 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 RN7SL390P-201ENST00000470634 284 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 RPA2P3-201ENST00000533268 770 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AL133247.2-201ENST00000603236 482 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 PSMA6P4-201ENST00000603247 718 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC002069.2-201ENST00000603580 883 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC010200.2-201ENST00000605098 235 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AC073488.9-201ENST00000631601 754 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 MRRFP1-201ENST00000435941 1675 ntBASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
HMGB1P1B2RPK0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 RNU6-603P-201ENST00000411403 107 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC017019.1-201ENST00000426129 261 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 MTCO3P21-201ENST00000430791 643 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 BSNDP4-201ENST00000436076 388 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC013403.1-201ENST00000436954 263 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 ST13P2-201ENST00000438916 1109 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 NDUFA5P8-201ENST00000449019 346 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 RN7SL308P-201ENST00000464971 297 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 TRBV5-2-201ENST00000489095 273 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 RN7SL37P-201ENST00000490461 307 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 HMGB1P3-201ENST00000502802 616 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 RNU6-760P-201ENST00000516078 97 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 RNU6-889P-201ENST00000517189 103 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 OR6M2P-201ENST00000529831 871 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 NDUFA3P2-201ENST00000531434 232 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC023158.1-201ENST00000561632 1025 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AP001120.4-201ENST00000590231 108 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC090953.1-201ENST00000604305 1092 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC092079.1-201ENST00000558620 1985 ntBASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGB1P1B2RPK0 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AL137141.1-201ENST00000624622 4836 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 AL034370.1-201ENST00000397254 1590 ntBASIC6.36□□□□□ -1.39
HMGB1P1B2RPK0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms