Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA4Q9Y5G9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA4Q9Y5G9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHGA4Q9Y5G9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA4Q9Y5G9 FEM1AP1-201ENST00000431297 1995 ntBASIC19.39■□□□□ 0.7
PCDHGA4Q9Y5G9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 REXO1L12P-201ENST00000622156 912 ntBASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 AC092720.2-201ENST00000602388 1665 ntBASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 AC073314.1-201ENST00000568729 2216 ntBASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA4Q9Y5G9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA4Q9Y5G9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 AP005212.1-201ENST00000581547 1997 ntBASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 LINC01521-201ENST00000504184 1943 ntBASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 C2orf69P4-201ENST00000565394 541 ntBASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 RN7SL602P-201ENST00000578326 324 ntBASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 LINC01023-201ENST00000606054 436 ntBASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA4Q9Y5G9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms