Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP003071.4-201ENST00000562276 1284 ntBASIC18.1■□□□□ 0.49
LRFN1Q9P244 AL353708.3-201ENST00000610272 989 ntBASIC18.1■□□□□ 0.49
LRFN1Q9P244 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN1Q9P244 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRFN1Q9P244 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRFN1Q9P244 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN1Q9P244 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN1Q9P244 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.1■□□□□ 0.49
LRFN1Q9P244 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN1Q9P244 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN1Q9P244 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN1Q9P244 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN1Q9P244 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN1Q9P244 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
LRFN1Q9P244 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN1Q9P244 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.08■□□□□ 0.49
LRFN1Q9P244 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN1Q9P244 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN1Q9P244 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.08■□□□□ 0.49
LRFN1Q9P244 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 AIRN-201ENST00000601203 4374 ntBASIC18.08■□□□□ 0.48
LRFN1Q9P244 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 ECEL1P3-201ENST00000427961 737 ntBASIC18.08■□□□□ 0.48
LRFN1Q9P244 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
LRFN1Q9P244 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.08■□□□□ 0.48
LRFN1Q9P244 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN1Q9P244 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 AC211429.1-201ENST00000415277 523 ntBASIC18.07■□□□□ 0.48
LRFN1Q9P244 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 YBX1P10-201ENST00000444752 975 ntBASIC18.07■□□□□ 0.48
LRFN1Q9P244 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.07■□□□□ 0.48
LRFN1Q9P244 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN1Q9P244 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN1Q9P244 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 AC020907.5-201ENST00000624372 1936 ntBASIC18.06■□□□□ 0.48
LRFN1Q9P244 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN1Q9P244 NIFKP9-201ENST00000419265 221 ntBASIC18.06■□□□□ 0.48
LRFN1Q9P244 KSR1P1-201ENST00000446298 240 ntBASIC18.06■□□□□ 0.48
LRFN1Q9P244 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.06■□□□□ 0.48
LRFN1Q9P244 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms