Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC88CQ9P219 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC88CQ9P219 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC88CQ9P219 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC88CQ9P219 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 Z99916.2-201ENST00000604037 246 ntBASIC18.82■□□□□ 0.6
CCDC88CQ9P219 AC110285.5-201ENST00000611501 352 ntBASIC18.82■□□□□ 0.6
CCDC88CQ9P219 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC88CQ9P219 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.81■□□□□ 0.6
CCDC88CQ9P219 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 AL049637.2-201ENST00000641778 930 ntBASIC18.81■□□□□ 0.6
CCDC88CQ9P219 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 RN7SL471P-201ENST00000580476 299 ntBASIC18.81■□□□□ 0.6
CCDC88CQ9P219 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC88CQ9P219 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 AL158211.5-201ENST00000623583 2518 ntBASIC18.8■□□□□ 0.6
CCDC88CQ9P219 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 RPS2P55-201ENST00000397318 883 ntBASIC18.8■□□□□ 0.6
CCDC88CQ9P219 AC107956.1-201ENST00000494359 873 ntBASIC18.8■□□□□ 0.6
CCDC88CQ9P219 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 AC007952.6-201ENST00000573168 2673 ntBASIC18.8■□□□□ 0.6
CCDC88CQ9P219 AC003957.1-201ENST00000625108 2673 ntBASIC18.8■□□□□ 0.6
CCDC88CQ9P219 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC88CQ9P219 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 AL121829.2-201ENST00000620908 328 ntBASIC18.79■□□□□ 0.6
CCDC88CQ9P219 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC88CQ9P219 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms