Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.69■□□□□ 0.74
TREX1Q9NSU2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 Z82202.1-201ENST00000623446 1880 ntBASIC19.68■□□□□ 0.74
TREX1Q9NSU2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TREX1Q9NSU2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TREX1Q9NSU2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.66■□□□□ 0.74
TREX1Q9NSU2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.65■□□□□ 0.74
TREX1Q9NSU2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TREX1Q9NSU2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TREX1Q9NSU2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TREX1Q9NSU2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TREX1Q9NSU2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TREX1Q9NSU2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TREX1Q9NSU2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TREX1Q9NSU2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms