Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 AL353708.3-201ENST00000610272 989 ntBASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN3LQ9H3M9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 KRT16P6-202ENST00000425692 1426 ntBASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 MMP23A-201ENST00000234610 1017 ntBASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3LQ9H3M9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.7■□□□□ 0.91
ATXN3LQ9H3M9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 AP006587.1-201ENST00000534129 1502 ntBASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 NUDT16P1-203ENST00000513809 620 ntBASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 CR392000.1-201ENST00000624770 1228 ntBASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.7■□□□□ 0.9
ATXN3LQ9H3M9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 MIR1224-201ENST00000408193 85 ntBASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 AC097493.4-201ENST00000641197 219 ntBASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3LQ9H3M9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.68■□□□□ 0.9
ATXN3LQ9H3M9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ATXN3LQ9H3M9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN3LQ9H3M9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.68■□□□□ 0.9
ATXN3LQ9H3M9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN3LQ9H3M9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.68■□□□□ 0.9
ATXN3LQ9H3M9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms