Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 HLA-G-202ENST00000376815 851 ntBASIC18.93■□□□□ 0.62
SPTBN4Q9H254 AC244107.1-201ENST00000442033 332 ntBASIC18.93■□□□□ 0.62
SPTBN4Q9H254 AC092597.1-201ENST00000487352 616 ntBASIC18.93■□□□□ 0.62
SPTBN4Q9H254 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.93■□□□□ 0.62
SPTBN4Q9H254 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SPTBN4Q9H254 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 AC011498.5-201ENST00000592027 486 ntBASIC18.92■□□□□ 0.62
SPTBN4Q9H254 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 MIR3197-201ENST00000582241 73 ntBASIC18.92■□□□□ 0.62
SPTBN4Q9H254 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.92■□□□□ 0.62
SPTBN4Q9H254 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPTBN4Q9H254 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 RASA4DP-201ENST00000460726 1199 ntBASIC18.91■□□□□ 0.62
SPTBN4Q9H254 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.91■□□□□ 0.62
SPTBN4Q9H254 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPTBN4Q9H254 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SPTBN4Q9H254 AP006587.1-201ENST00000534129 1502 ntBASIC18.89■□□□□ 0.62
SPTBN4Q9H254 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 AP000867.3-201ENST00000524675 377 ntBASIC18.89■□□□□ 0.61
SPTBN4Q9H254 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTBN4Q9H254 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms