Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-3Q9BYR6 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-3Q9BYR6 NT5C3AP1-202ENST00000441170 1663 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 OR4C15-201ENST00000314644 1113 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 UQCRFS1P3-201ENST00000407697 385 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 UBE2D4-206ENST00000446008 783 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC092634.3-201ENST00000450544 637 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC114781.4-201ENST00000513707 639 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 SCARNA9-201ENST00000530422 353 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 MTND3P13-201ENST00000574391 343 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 AC005479.3-201ENST00000602790 431 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 PPATP2-201ENST00000605635 508 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 Metazoa_SRP.102-201ENST00000613350 315 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 EDRF1-AS1-211ENST00000615461 592 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 HNRNPLP2-201ENST00000568980 1570 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 MIR219A2-201ENST00000608502 1504 ntBASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-3Q9BYR6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AC099689.1-201ENST00000624383 1302 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AL139415.1-201ENST00000424862 352 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 CDK7P1-201ENST00000434574 693 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 NPM1P33-201ENST00000438918 872 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 NDUFAF4P4-201ENST00000454883 502 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 VN1R40P-201ENST00000455196 941 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 OR8G5-201ENST00000524943 1041 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 OSBPL9P3-201ENST00000534523 595 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AC024909.2-201ENST00000553035 286 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AC092718.2-203ENST00000561808 789 ntTSL 3 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AC112484.4-201ENST00000567253 811 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AC021171.1-201ENST00000603137 706 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AP000942.4-201ENST00000604811 241 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AL359643.3-201ENST00000606761 1086 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 AL359697.1-201ENST00000624879 587 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 CASC19-264ENST00000641912 1184 ntBASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-3Q9BYR6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
KRTAP3-3Q9BYR6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC12.15□□□□□ -0.47
KRTAP3-3Q9BYR6 CD9-212ENST00000610354 1315 ntTSL 5 BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 PLGLB1-201ENST00000355705 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 SMIM9-201ENST00000369529 904 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 LDHAP7-201ENST00000398295 965 ntBASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 RFPL3S-203ENST00000400234 1295 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 AL355379.1-201ENST00000405542 640 ntBASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC12.14□□□□□ -0.47
KRTAP3-3Q9BYR6 NPM1P26-201ENST00000426339 738 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms