Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 AL121906.2-201ENST00000621597 723 ntBASIC13.7□□□□□ -0.22
UPK3BQ9BT76 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK3BQ9BT76 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 AC239809.2-201ENST00000415381 517 ntBASIC13.69□□□□□ -0.22
UPK3BQ9BT76 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 AC233263.1-201ENST00000578059 224 ntBASIC13.69□□□□□ -0.22
UPK3BQ9BT76 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK3BQ9BT76 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 AL158211.5-201ENST00000623583 2518 ntBASIC13.68□□□□□ -0.22
UPK3BQ9BT76 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 KRT8P17-201ENST00000453110 1448 ntBASIC13.68□□□□□ -0.22
UPK3BQ9BT76 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 MIR718-201ENST00000390190 70 ntBASIC13.68□□□□□ -0.22
UPK3BQ9BT76 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 AC093827.2-201ENST00000512654 315 ntBASIC13.68□□□□□ -0.22
UPK3BQ9BT76 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 AC092720.2-201ENST00000602388 1665 ntBASIC13.68□□□□□ -0.22
UPK3BQ9BT76 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms