Protein–RNA interactions for Protein: Q96NR8

RDH12, Retinol dehydrogenase 12, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12Q96NR8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 AC093525.10-201ENST00000625130 1569 ntBASIC18.1■□□□□ 0.49
RDH12Q96NR8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 AC099791.1-201ENST00000416440 715 ntBASIC18.1■□□□□ 0.49
RDH12Q96NR8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 AC131281.2-201ENST00000520478 145 ntBASIC18.1■□□□□ 0.49
RDH12Q96NR8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RDH12Q96NR8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RDH12Q96NR8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 AL031598.1-201ENST00000561511 1773 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 CDV3P1-201ENST00000471403 739 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L2-201ENST00000561772 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 CCDC92B-201ENST00000575506 885 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 AC008764.7-201ENST00000593779 1081 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L6-201ENST00000626483 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L1-201ENST00000627662 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L8-201ENST00000629013 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L3-201ENST00000630187 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L7-201ENST00000630678 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 DUX4L5-201ENST00000630834 1275 ntBASIC18.09■□□□□ 0.49
RDH12Q96NR8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RDH12Q96NR8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RDH12Q96NR8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RDH12Q96NR8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RDH12Q96NR8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.08■□□□□ 0.49
RDH12Q96NR8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RDH12Q96NR8 RBM17P2-201ENST00000616397 1405 ntBASIC18.08■□□□□ 0.49
RDH12Q96NR8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RDH12Q96NR8 BICD1-207ENST00000551848 1962 ntBASIC18.08■□□□□ 0.49
RDH12Q96NR8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RDH12Q96NR8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RDH12Q96NR8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RDH12Q96NR8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 AC141586.3-201ENST00000562166 1838 ntBASIC18.08■□□□□ 0.48
RDH12Q96NR8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 UNC93B3-201ENST00000308076 687 ntBASIC18.08■□□□□ 0.48
RDH12Q96NR8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 AC024257.2-201ENST00000549699 147 ntBASIC18.08■□□□□ 0.48
RDH12Q96NR8 SLC7A5P2-201ENST00000553010 536 ntBASIC18.08■□□□□ 0.48
RDH12Q96NR8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.08■□□□□ 0.48
RDH12Q96NR8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 Z98044.1-201ENST00000632503 1764 ntBASIC18.08■□□□□ 0.48
RDH12Q96NR8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RDH12Q96NR8 AC005332.8-201ENST00000622750 2735 ntBASIC18.08■□□□□ 0.48
RDH12Q96NR8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms