Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 RCN1P1-201ENST00000400413 996 ntBASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 RBM17P1-201ENST00000453646 1190 ntBASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 AC079598.2-202ENST00000546624 1451 ntBASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.71■□□□□ 0.91
SHKBP1Q8TBC3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 AC007225.1-201ENST00000566331 1836 ntBASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 NIFKP9-201ENST00000419265 221 ntBASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 CR392000.1-201ENST00000624770 1228 ntBASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHKBP1Q8TBC3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 KSR1P1-201ENST00000446298 240 ntBASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 AP000525.1-201ENST00000608286 694 ntBASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 KRT8P9-201ENST00000558927 1449 ntBASIC20.69■□□□□ 0.9
SHKBP1Q8TBC3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 AC007952.6-201ENST00000573168 2673 ntBASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 AC003957.1-201ENST00000625108 2673 ntBASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHKBP1Q8TBC3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.67■□□□□ 0.9
SHKBP1Q8TBC3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms