Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL27A1Q8IZC6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 UPK3BP1-201ENST00000428678 509 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 AC116407.4-201ENST00000623319 1061 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 KRT8P8-201ENST00000434750 1448 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 AC133561.1-201ENST00000568600 2415 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 KRT16P6-202ENST00000425692 1426 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 AC010653.2-201ENST00000623505 997 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 AC092720.2-201ENST00000602388 1665 ntBASIC18.67■□□□□ 0.58
COL27A1Q8IZC6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
COL27A1Q8IZC6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 AC026310.3-201ENST00000625186 2373 ntBASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL27A1Q8IZC6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL27A1Q8IZC6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COL27A1Q8IZC6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.64■□□□□ 0.58
COL27A1Q8IZC6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL27A1Q8IZC6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 DUSP5P1-201ENST00000441325 1139 ntBASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.64■□□□□ 0.57
COL27A1Q8IZC6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms