Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 CCR12P-201ENST00000446203 998 ntBASIC13.78□□□□□ -0.2
CSMD3Q7Z407 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD3Q7Z407 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 STK25-234ENST00000535007 2459 ntTSL 2 BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSMD3Q7Z407 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 EP400NL-214ENST00000641289 2402 ntBASIC13.77□□□□□ -0.21
CSMD3Q7Z407 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.77□□□□□ -0.21
CSMD3Q7Z407 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
CSMD3Q7Z407 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.76□□□□□ -0.21
CSMD3Q7Z407 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 MFAP1P1-201ENST00000442257 1255 ntBASIC13.76□□□□□ -0.21
CSMD3Q7Z407 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 AC010653.2-201ENST00000623505 997 ntBASIC13.76□□□□□ -0.21
CSMD3Q7Z407 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSMD3Q7Z407 KRT8P20-201ENST00000423953 1409 ntBASIC13.75□□□□□ -0.21
CSMD3Q7Z407 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 KRT18P38-201ENST00000449496 1282 ntBASIC13.75□□□□□ -0.21
CSMD3Q7Z407 KRT17P6-201ENST00000453795 1220 ntBASIC13.75□□□□□ -0.21
CSMD3Q7Z407 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.75□□□□□ -0.21
CSMD3Q7Z407 Z85996.1-201ENST00000494644 937 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms