Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COLCA1Q6ZS62 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA1Q6ZS62 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA1Q6ZS62 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 POM121L13P-201ENST00000422362 380 ntBASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.99■□□□□ 0.31
COLCA1Q6ZS62 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 KRT18P6-201ENST00000555540 1265 ntBASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.98■□□□□ 0.31
COLCA1Q6ZS62 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COLCA1Q6ZS62 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 RNA5SP413-201ENST00000516373 109 ntBASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COLCA1Q6ZS62 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COLCA1Q6ZS62 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms