Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 AL031133.1-201ENST00000406807 723 ntBASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
CDC42BPAQ5VT25 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 KRT8P8-201ENST00000434750 1448 ntBASIC30■■■□□ 2.39
CDC42BPAQ5VT25 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
CDC42BPAQ5VT25 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDC42BPAQ5VT25 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 GXYLT1P6-201ENST00000456472 1187 ntBASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 AC083849.1-201ENST00000615227 514 ntBASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 AC010653.2-201ENST00000623505 997 ntBASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
CDC42BPAQ5VT25 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDC42BPAQ5VT25 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 UPK3BP1-201ENST00000428678 509 ntBASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 SAPCD2P2-201ENST00000431719 1174 ntBASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 AC026310.3-201ENST00000625186 2373 ntBASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
CDC42BPAQ5VT25 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CDC42BPAQ5VT25 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CDC42BPAQ5VT25 CCR12P-201ENST00000446203 998 ntBASIC29.95■■■□□ 2.38
CDC42BPAQ5VT25 AL359075.1-203ENST00000462729 1002 ntBASIC29.95■■■□□ 2.38
CDC42BPAQ5VT25 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CDC42BPAQ5VT25 MOK-225ENST00000522867 1883 ntTSL 5 BASIC29.95■■■□□ 2.38
CDC42BPAQ5VT25 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 STK25-234ENST00000535007 2459 ntTSL 2 BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDC42BPAQ5VT25 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms