Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 AL773604.1-201ENST00000617417 272 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 ECEL1P1-201ENST00000373592 1742 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 KRT18P67-201ENST00000432816 1264 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 METTL21AP1-201ENST00000438852 635 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 TSPY17P-201ENST00000450329 467 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 SEC1P-202ENST00000473944 940 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 C1QL1P1-201ENST00000568105 661 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 AL353801.3-201ENST00000609898 542 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 ABCB10P4-201ENST00000566803 2184 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.88□□□□□ -0.67
UBR4Q5T4S7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UBR4Q5T4S7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 GXYLT1P6-201ENST00000456472 1187 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 NEK4P2-201ENST00000580004 1012 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AC211486.1-202ENST00000416371 468 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AC211476.1-201ENST00000503899 468 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AC083906.6-201ENST00000641366 219 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AC079781.4-201ENST00000641908 219 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 LINC00265-3P-201ENST00000447588 903 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 MIR3687-2-201ENST00000577708 61 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC10.87□□□□□ -0.67
UBR4Q5T4S7 MIR3687-1-201ENST00000614492 61 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 AC004812.2-201ENST00000611079 2094 ntBASIC10.87□□□□□ -0.67
UBR4Q5T4S7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 AF238378.1-201ENST00000526806 358 ntBASIC10.86□□□□□ -0.67
UBR4Q5T4S7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
UBR4Q5T4S7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms