Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ALFQ53S48 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALFQ53S48 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ALFQ53S48 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
ALFQ53S48 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 AC073130.3-201ENST00000624389 2278 ntBASIC20.29■□□□□ 0.84
ALFQ53S48 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.29■□□□□ 0.84
ALFQ53S48 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.29■□□□□ 0.84
ALFQ53S48 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ALFQ53S48 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 NBPF21P-201ENST00000425093 1451 ntBASIC20.29■□□□□ 0.84
ALFQ53S48 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.29■□□□□ 0.84
ALFQ53S48 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALFQ53S48 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.29■□□□□ 0.84
ALFQ53S48 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
ALFQ53S48 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.28■□□□□ 0.84
ALFQ53S48 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.28■□□□□ 0.84
ALFQ53S48 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ALFQ53S48 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.28■□□□□ 0.84
ALFQ53S48 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.28■□□□□ 0.84
ALFQ53S48 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ALFQ53S48 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.28■□□□□ 0.84
ALFQ53S48 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.28■□□□□ 0.84
ALFQ53S48 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.28■□□□□ 0.84
ALFQ53S48 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.28■□□□□ 0.84
ALFQ53S48 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.28■□□□□ 0.84
ALFQ53S48 AP001271.2-201ENST00000624018 1556 ntBASIC20.28■□□□□ 0.84
ALFQ53S48 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.28■□□□□ 0.84
ALFQ53S48 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.28■□□□□ 0.84
ALFQ53S48 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALFQ53S48 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.27■□□□□ 0.84
ALFQ53S48 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
ALFQ53S48 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.27■□□□□ 0.84
ALFQ53S48 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.27■□□□□ 0.84
ALFQ53S48 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ALFQ53S48 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.27■□□□□ 0.84
ALFQ53S48 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.27■□□□□ 0.84
ALFQ53S48 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.27■□□□□ 0.84
ALFQ53S48 AC110285.5-201ENST00000611501 352 ntBASIC20.27■□□□□ 0.84
ALFQ53S48 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALFQ53S48 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.27■□□□□ 0.84
ALFQ53S48 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
ALFQ53S48 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
ALFQ53S48 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ALFQ53S48 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ALFQ53S48 AP006587.1-201ENST00000534129 1502 ntBASIC20.27■□□□□ 0.83
ALFQ53S48 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ALFQ53S48 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.26■□□□□ 0.83
ALFQ53S48 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ALFQ53S48 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.26■□□□□ 0.83
ALFQ53S48 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.26■□□□□ 0.83
ALFQ53S48 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.26■□□□□ 0.83
ALFQ53S48 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.26■□□□□ 0.83
ALFQ53S48 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.26■□□□□ 0.83
ALFQ53S48 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.26■□□□□ 0.83
ALFQ53S48 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALFQ53S48 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms