Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF3Q3KNV8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 AC120498.9-201ENST00000339021 3867 ntBASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 KRT18P6-201ENST00000555540 1265 ntBASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF3Q3KNV8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCGF3Q3KNV8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCGF3Q3KNV8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.39■□□□□ 0.38
PCGF3Q3KNV8 AC087633.2-202ENST00000565166 1439 ntBASIC17.39■□□□□ 0.38
PCGF3Q3KNV8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 AL355472.2-201ENST00000422958 438 ntBASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 DUSP5P2-201ENST00000426873 1033 ntBASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 AC091874.3-201ENST00000512672 1195 ntBASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 CD99P1-205ENST00000527459 561 ntBASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF3Q3KNV8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms