Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDS5AQ29RF7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 B3GAT3P1-201ENST00000471720 806 ntBASIC23.71■■□□□ 1.39
PDS5AQ29RF7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 AP000525.1-201ENST00000608286 694 ntBASIC23.71■■□□□ 1.39
PDS5AQ29RF7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PDS5AQ29RF7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDS5AQ29RF7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.7■■□□□ 1.39
PDS5AQ29RF7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PDS5AQ29RF7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 MIR6786-201ENST00000616843 113 ntBASIC23.7■■□□□ 1.38
PDS5AQ29RF7 AC133561.5-201ENST00000635547 218 ntBASIC23.7■■□□□ 1.38
PDS5AQ29RF7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PDS5AQ29RF7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 AC131212.4-201ENST00000623606 975 ntBASIC23.69■■□□□ 1.38
PDS5AQ29RF7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDS5AQ29RF7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDS5AQ29RF7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 AP005242.2-201ENST00000580065 1175 ntBASIC23.67■■□□□ 1.38
PDS5AQ29RF7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 AL691432.2-201ENST00000607222 2038 ntBASIC23.67■■□□□ 1.38
PDS5AQ29RF7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.67■■□□□ 1.38
PDS5AQ29RF7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms