Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC34.97■■■■□ 3.19
HMGXB3Q12766 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC34.97■■■■□ 3.19
HMGXB3Q12766 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
HMGXB3Q12766 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
HMGXB3Q12766 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC34.96■■■■□ 3.19
HMGXB3Q12766 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
HMGXB3Q12766 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC34.96■■■■□ 3.19
HMGXB3Q12766 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
HMGXB3Q12766 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
HMGXB3Q12766 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC34.96■■■■□ 3.19
HMGXB3Q12766 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
HMGXB3Q12766 NEK4P2-201ENST00000580004 1012 ntBASIC34.96■■■■□ 3.19
HMGXB3Q12766 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC34.95■■■■□ 3.19
HMGXB3Q12766 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
HMGXB3Q12766 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC34.95■■■■□ 3.19
HMGXB3Q12766 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC34.95■■■■□ 3.19
HMGXB3Q12766 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
HMGXB3Q12766 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
HMGXB3Q12766 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC34.95■■■■□ 3.19
HMGXB3Q12766 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC34.95■■■■□ 3.19
HMGXB3Q12766 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
HMGXB3Q12766 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC34.94■■■■□ 3.18
HMGXB3Q12766 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
HMGXB3Q12766 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC34.94■■■■□ 3.18
HMGXB3Q12766 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC34.94■■■■□ 3.18
HMGXB3Q12766 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC34.94■■■■□ 3.18
HMGXB3Q12766 AP000523.1-201ENST00000398242 1049 ntBASIC34.94■■■■□ 3.18
HMGXB3Q12766 KRT17P6-201ENST00000453795 1220 ntBASIC34.94■■■■□ 3.18
HMGXB3Q12766 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC34.94■■■■□ 3.18
HMGXB3Q12766 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC34.94■■■■□ 3.18
HMGXB3Q12766 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
HMGXB3Q12766 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
HMGXB3Q12766 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC34.93■■■■□ 3.18
HMGXB3Q12766 PRR29-207ENST00000580752 458 ntTSL 3 BASIC34.93■■■■□ 3.18
HMGXB3Q12766 RN7SL510P-201ENST00000581311 263 ntBASIC34.93■■■■□ 3.18
HMGXB3Q12766 BCL10-202ENST00000620248 774 ntTSL 5 BASIC34.93■■■■□ 3.18
HMGXB3Q12766 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
HMGXB3Q12766 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
HMGXB3Q12766 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
HMGXB3Q12766 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
HMGXB3Q12766 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
HMGXB3Q12766 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 NT5C-210ENST00000582160 860 ntTSL 2 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
HMGXB3Q12766 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
HMGXB3Q12766 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC34.92■■■■□ 3.18
HMGXB3Q12766 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC34.92■■■■□ 3.18
HMGXB3Q12766 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
HMGXB3Q12766 AC111152.3-201ENST00000569699 673 ntBASIC34.91■■■■□ 3.18
HMGXB3Q12766 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC34.91■■■■□ 3.18
HMGXB3Q12766 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
HMGXB3Q12766 KRT8P45-201ENST00000414328 1447 ntBASIC34.91■■■■□ 3.18
HMGXB3Q12766 KRT8P10-201ENST00000450021 1447 ntBASIC34.91■■■■□ 3.18
HMGXB3Q12766 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC34.91■■■■□ 3.18
HMGXB3Q12766 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC34.91■■■■□ 3.18
HMGXB3Q12766 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC34.91■■■■□ 3.18
HMGXB3Q12766 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
HMGXB3Q12766 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC34.91■■■■□ 3.18
HMGXB3Q12766 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC34.91■■■■□ 3.18
HMGXB3Q12766 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
HMGXB3Q12766 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC34.91■■■■□ 3.18
HMGXB3Q12766 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
HMGXB3Q12766 PHGDH-210ENST00000641115 1638 ntBASIC34.91■■■■□ 3.18
HMGXB3Q12766 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC34.9■■■■□ 3.18
HMGXB3Q12766 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC34.9■■■■□ 3.18
HMGXB3Q12766 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC34.9■■■■□ 3.18
HMGXB3Q12766 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC34.9■■■■□ 3.18
HMGXB3Q12766 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
HMGXB3Q12766 KLK8-205ENST00000593490 267 ntTSL 3 BASIC34.9■■■■□ 3.18
HMGXB3Q12766 AL121603.2-201ENST00000557373 2117 ntBASIC34.89■■■■□ 3.18
HMGXB3Q12766 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
HMGXB3Q12766 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC34.89■■■■□ 3.18
HMGXB3Q12766 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
HMGXB3Q12766 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
HMGXB3Q12766 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC34.89■■■■□ 3.18
HMGXB3Q12766 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC34.89■■■■□ 3.18
HMGXB3Q12766 SDHD-206ENST00000528182 754 ntTSL 3 BASIC34.89■■■■□ 3.18
HMGXB3Q12766 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
HMGXB3Q12766 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC34.89■■■■□ 3.18
HMGXB3Q12766 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.18
HMGXB3Q12766 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC34.88■■■■□ 3.17
HMGXB3Q12766 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
HMGXB3Q12766 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
HMGXB3Q12766 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC34.88■■■■□ 3.17
HMGXB3Q12766 AC004263.2-201ENST00000617183 678 ntBASIC34.88■■■■□ 3.17
HMGXB3Q12766 CR769767.2-201ENST00000622735 460 ntBASIC34.88■■■■□ 3.17
HMGXB3Q12766 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
HMGXB3Q12766 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC34.88■■■■□ 3.17
HMGXB3Q12766 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
HMGXB3Q12766 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms