Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4XP62701 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPS4XP62701 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.8■□□□□ 0.44
RPS4XP62701 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 PRORSD1P-201ENST00000295112 541 ntBASIC17.8■□□□□ 0.44
RPS4XP62701 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4XP62701 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.8■□□□□ 0.44
RPS4XP62701 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.8■□□□□ 0.44
RPS4XP62701 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.8■□□□□ 0.44
RPS4XP62701 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPS4XP62701 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4XP62701 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4XP62701 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPS4XP62701 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPS4XP62701 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPS4XP62701 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPS4XP62701 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.79■□□□□ 0.44
RPS4XP62701 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.79■□□□□ 0.44
RPS4XP62701 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RPS4XP62701 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.79■□□□□ 0.44
RPS4XP62701 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.79■□□□□ 0.44
RPS4XP62701 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPS4XP62701 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.79■□□□□ 0.44
RPS4XP62701 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4XP62701 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4XP62701 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RPS4XP62701 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.78■□□□□ 0.44
RPS4XP62701 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.78■□□□□ 0.44
RPS4XP62701 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.78■□□□□ 0.44
RPS4XP62701 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.78■□□□□ 0.44
RPS4XP62701 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.78■□□□□ 0.44
RPS4XP62701 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RPS4XP62701 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4XP62701 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4XP62701 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RPS4XP62701 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.77■□□□□ 0.44
RPS4XP62701 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RPS4XP62701 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RPS4XP62701 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPS4XP62701 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RPS4XP62701 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.77■□□□□ 0.44
RPS4XP62701 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.77■□□□□ 0.44
RPS4XP62701 AP006294.2-201ENST00000641667 209 ntBASIC17.77■□□□□ 0.44
RPS4XP62701 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms