Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 KRT8P9-201ENST00000558927 1449 ntBASIC19.51■□□□□ 0.71
CLDN2P57739 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN2P57739 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN2P57739 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN2P57739 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN2P57739 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.5■□□□□ 0.71
CLDN2P57739 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.5■□□□□ 0.71
CLDN2P57739 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLDN2P57739 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLDN2P57739 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN2P57739 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN2P57739 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN2P57739 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.49■□□□□ 0.71
CLDN2P57739 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLDN2P57739 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN2P57739 YBX1P10-201ENST00000444752 975 ntBASIC19.49■□□□□ 0.71
CLDN2P57739 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN2P57739 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.49■□□□□ 0.71
CLDN2P57739 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 AC012306.2-201ENST00000609350 630 ntBASIC19.49■□□□□ 0.71
CLDN2P57739 AC097493.4-201ENST00000641197 219 ntBASIC19.49■□□□□ 0.71
CLDN2P57739 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN2P57739 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN2P57739 AC073314.1-201ENST00000568729 2216 ntBASIC19.49■□□□□ 0.71
CLDN2P57739 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN2P57739 AC020907.5-201ENST00000624372 1936 ntBASIC19.49■□□□□ 0.71
CLDN2P57739 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN2P57739 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLDN2P57739 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN2P57739 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN2P57739 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN2P57739 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN2P57739 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 UNC93B2-201ENST00000285383 730 ntBASIC19.48■□□□□ 0.71
CLDN2P57739 MIR1238-201ENST00000408483 83 ntBASIC19.48■□□□□ 0.71
CLDN2P57739 AL390955.1-201ENST00000428694 934 ntBASIC19.48■□□□□ 0.71
CLDN2P57739 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN2P57739 TUBB8P6-201ENST00000436895 1288 ntBASIC19.48■□□□□ 0.71
CLDN2P57739 KRT18P16-201ENST00000510337 1294 ntBASIC19.48■□□□□ 0.71
CLDN2P57739 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.48■□□□□ 0.71
CLDN2P57739 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN2P57739 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN2P57739 BX119927.1-201ENST00000636596 1552 ntBASIC19.48■□□□□ 0.71
CLDN2P57739 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN2P57739 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN2P57739 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLDN2P57739 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN2P57739 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN2P57739 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN2P57739 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN2P57739 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLDN2P57739 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
CLDN2P57739 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN2P57739 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN2P57739 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN2P57739 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN2P57739 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN2P57739 AC116562.2-201ENST00000507042 360 ntBASIC19.46■□□□□ 0.71
CLDN2P57739 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN2P57739 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN2P57739 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN2P57739 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms