Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.76■■□□□ 1.07
PEX3P56589 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.76■■□□□ 1.07
PEX3P56589 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PEX3P56589 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PEX3P56589 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PEX3P56589 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PEX3P56589 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PEX3P56589 AP006587.1-201ENST00000534129 1502 ntBASIC21.75■■□□□ 1.07
PEX3P56589 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.75■■□□□ 1.07
PEX3P56589 AC110285.5-201ENST00000611501 352 ntBASIC21.75■■□□□ 1.07
PEX3P56589 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.75■■□□□ 1.07
PEX3P56589 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.75■■□□□ 1.07
PEX3P56589 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX3P56589 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.74■■□□□ 1.07
PEX3P56589 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
PEX3P56589 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PEX3P56589 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PEX3P56589 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PEX3P56589 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.74■■□□□ 1.07
PEX3P56589 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.74■■□□□ 1.07
PEX3P56589 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PEX3P56589 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.74■■□□□ 1.07
PEX3P56589 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.74■■□□□ 1.07
PEX3P56589 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.74■■□□□ 1.07
PEX3P56589 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PEX3P56589 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX3P56589 AC009237.14-201ENST00000609975 1594 ntBASIC21.74■■□□□ 1.07
PEX3P56589 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.73■■□□□ 1.07
PEX3P56589 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.73■■□□□ 1.07
PEX3P56589 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PEX3P56589 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.73■■□□□ 1.07
PEX3P56589 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.73■■□□□ 1.07
PEX3P56589 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PEX3P56589 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PEX3P56589 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PEX3P56589 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PEX3P56589 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PEX3P56589 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX3P56589 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PEX3P56589 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.72■■□□□ 1.07
PEX3P56589 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PEX3P56589 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PEX3P56589 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.72■■□□□ 1.07
PEX3P56589 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.72■■□□□ 1.07
PEX3P56589 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.72■■□□□ 1.07
PEX3P56589 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.72■■□□□ 1.07
PEX3P56589 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.72■■□□□ 1.07
PEX3P56589 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.72■■□□□ 1.07
PEX3P56589 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.72■■□□□ 1.07
PEX3P56589 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
PEX3P56589 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.72■■□□□ 1.07
PEX3P56589 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PEX3P56589 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX3P56589 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PEX3P56589 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms