Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC6A9P48067 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A9P48067 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 HLA-G-202ENST00000376815 851 ntBASIC17.41■□□□□ 0.38
SLC6A9P48067 HLA-G-203ENST00000376818 1127 ntBASIC17.41■□□□□ 0.38
SLC6A9P48067 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC6A9P48067 AC083906.2-201ENST00000511578 360 ntBASIC17.41■□□□□ 0.38
SLC6A9P48067 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC6A9P48067 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A9P48067 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A9P48067 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A9P48067 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 AC090340.1-201ENST00000620778 4980 ntBASIC17.41■□□□□ 0.38
SLC6A9P48067 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A9P48067 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A9P48067 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 AC020763.4-201ENST00000623414 4170 ntBASIC17.4■□□□□ 0.38
SLC6A9P48067 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A9P48067 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A9P48067 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.4■□□□□ 0.38
SLC6A9P48067 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A9P48067 C2orf69P4-201ENST00000565394 541 ntBASIC17.4■□□□□ 0.38
SLC6A9P48067 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A9P48067 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A9P48067 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A9P48067 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A9P48067 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A9P48067 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A9P48067 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A9P48067 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A9P48067 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A9P48067 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A9P48067 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC6A9P48067 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A9P48067 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC6A9P48067 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SLC6A9P48067 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A9P48067 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A9P48067 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A9P48067 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A9P48067 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A9P48067 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC6A9P48067 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.39■□□□□ 0.37
SLC6A9P48067 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A9P48067 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
SLC6A9P48067 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A9P48067 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A9P48067 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A9P48067 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A9P48067 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC6A9P48067 BX276092.2-201ENST00000417668 665 ntBASIC17.38■□□□□ 0.37
SLC6A9P48067 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A9P48067 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A9P48067 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A9P48067 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.38■□□□□ 0.37
SLC6A9P48067 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC6A9P48067 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 AL020996.1-203ENST00000536896 2307 ntBASIC17.38■□□□□ 0.37
SLC6A9P48067 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SLC6A9P48067 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A9P48067 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC6A9P48067 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A9P48067 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC6A9P48067 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms