Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX11P35716 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX11P35716 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.2■□□□□ 0.66
SOX11P35716 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SOX11P35716 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.2■□□□□ 0.66
SOX11P35716 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX11P35716 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SOX11P35716 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SOX11P35716 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SOX11P35716 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
SOX11P35716 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 AC097658.1-201ENST00000475555 843 ntBASIC19.19■□□□□ 0.66
SOX11P35716 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.19■□□□□ 0.66
SOX11P35716 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.19■□□□□ 0.66
SOX11P35716 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX11P35716 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX11P35716 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SOX11P35716 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SOX11P35716 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.18■□□□□ 0.66
SOX11P35716 DUSP5P2-201ENST00000426873 1033 ntBASIC19.18■□□□□ 0.66
SOX11P35716 POU5F1P3-201ENST00000428824 1078 ntBASIC19.18■□□□□ 0.66
SOX11P35716 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.18■□□□□ 0.66
SOX11P35716 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.18■□□□□ 0.66
SOX11P35716 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.18■□□□□ 0.66
SOX11P35716 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.18■□□□□ 0.66
SOX11P35716 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX11P35716 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
SOX11P35716 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.17■□□□□ 0.66
SOX11P35716 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 CDV3P1-201ENST00000471403 739 ntBASIC19.17■□□□□ 0.66
SOX11P35716 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 AC100791.3-201ENST00000617619 330 ntBASIC19.17■□□□□ 0.66
SOX11P35716 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.17■□□□□ 0.66
SOX11P35716 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SOX11P35716 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SOX11P35716 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.17■□□□□ 0.66
SOX11P35716 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SOX11P35716 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms