Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCD3P28288 AC239809.2-201ENST00000415381 517 ntBASIC18.19■□□□□ 0.5
ABCD3P28288 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCD3P28288 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCD3P28288 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCD3P28288 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.19■□□□□ 0.5
ABCD3P28288 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ABCD3P28288 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.19■□□□□ 0.5
ABCD3P28288 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.19■□□□□ 0.5
ABCD3P28288 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCD3P28288 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ABCD3P28288 AC009237.14-201ENST00000609975 1594 ntBASIC18.19■□□□□ 0.5
ABCD3P28288 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCD3P28288 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCD3P28288 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCD3P28288 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCD3P28288 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCD3P28288 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ABCD3P28288 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ABCD3P28288 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.18■□□□□ 0.5
ABCD3P28288 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.18■□□□□ 0.5
ABCD3P28288 RPPH1-201ENST00000516869 333 ntBASIC18.18■□□□□ 0.5
ABCD3P28288 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.18■□□□□ 0.5
ABCD3P28288 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ABCD3P28288 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.18■□□□□ 0.5
ABCD3P28288 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCD3P28288 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ABCD3P28288 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 AP006587.1-201ENST00000534129 1502 ntBASIC18.18■□□□□ 0.5
ABCD3P28288 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCD3P28288 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCD3P28288 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.18■□□□□ 0.5
ABCD3P28288 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCD3P28288 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ABCD3P28288 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 KRASP1-201ENST00000407852 552 ntBASIC18.17■□□□□ 0.5
ABCD3P28288 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.17■□□□□ 0.5
ABCD3P28288 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.17■□□□□ 0.5
ABCD3P28288 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 AC124016.1-201ENST00000609552 612 ntBASIC18.17■□□□□ 0.5
ABCD3P28288 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ABCD3P28288 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.17■□□□□ 0.5
ABCD3P28288 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCD3P28288 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCD3P28288 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCD3P28288 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 GCSHP5-201ENST00000443090 522 ntBASIC18.16■□□□□ 0.5
ABCD3P28288 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCD3P28288 AC133681.1-201ENST00000465482 601 ntBASIC18.16■□□□□ 0.5
ABCD3P28288 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCD3P28288 AC142381.4-202ENST00000563973 229 ntBASIC18.16■□□□□ 0.5
ABCD3P28288 AL359736.2-201ENST00000621992 437 ntBASIC18.16■□□□□ 0.5
ABCD3P28288 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCD3P28288 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCD3P28288 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCD3P28288 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCD3P28288 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms