Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 KRT18P22-201ENST00000402024 1347 ntBASIC25.2■■□□□ 1.62
SNRPA1P09661 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRPA1P09661 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.2■■□□□ 1.62
SNRPA1P09661 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC25.2■■□□□ 1.62
SNRPA1P09661 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.2■■□□□ 1.62
SNRPA1P09661 AP005242.2-201ENST00000580065 1175 ntBASIC25.2■■□□□ 1.62
SNRPA1P09661 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.2■■□□□ 1.62
SNRPA1P09661 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.2■■□□□ 1.62
SNRPA1P09661 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRPA1P09661 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRPA1P09661 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
SNRPA1P09661 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
SNRPA1P09661 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SNRPA1P09661 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
SNRPA1P09661 AC005521.1-201ENST00000393351 872 ntBASIC25.19■■□□□ 1.62
SNRPA1P09661 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.19■■□□□ 1.62
SNRPA1P09661 AC130371.2-201ENST00000619443 611 ntBASIC25.19■■□□□ 1.62
SNRPA1P09661 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SNRPA1P09661 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
SNRPA1P09661 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SNRPA1P09661 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.19■■□□□ 1.62
SNRPA1P09661 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SNRPA1P09661 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 AC113347.1-201ENST00000413321 391 ntBASIC25.18■■□□□ 1.62
SNRPA1P09661 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.18■■□□□ 1.62
SNRPA1P09661 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.18■■□□□ 1.62
SNRPA1P09661 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.18■■□□□ 1.62
SNRPA1P09661 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.18■■□□□ 1.62
SNRPA1P09661 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.18■■□□□ 1.62
SNRPA1P09661 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SNRPA1P09661 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.18■■□□□ 1.62
SNRPA1P09661 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNRPA1P09661 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.18■■□□□ 1.62
SNRPA1P09661 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.18■■□□□ 1.62
SNRPA1P09661 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
SNRPA1P09661 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
SNRPA1P09661 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
SNRPA1P09661 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.17■■□□□ 1.62
SNRPA1P09661 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
SNRPA1P09661 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SNRPA1P09661 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.17■■□□□ 1.62
SNRPA1P09661 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRPA1P09661 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRPA1P09661 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRPA1P09661 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRPA1P09661 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRPA1P09661 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.16■■□□□ 1.62
SNRPA1P09661 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.16■■□□□ 1.62
SNRPA1P09661 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRPA1P09661 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SNRPA1P09661 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNRPA1P09661 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.15■■□□□ 1.62
SNRPA1P09661 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNRPA1P09661 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.15■■□□□ 1.62
SNRPA1P09661 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SNRPA1P09661 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNRPA1P09661 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
SNRPA1P09661 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.15■■□□□ 1.62
SNRPA1P09661 AC097488.1-201ENST00000507834 756 ntBASIC25.15■■□□□ 1.62
SNRPA1P09661 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.15■■□□□ 1.62
SNRPA1P09661 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms