Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF3O95398 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
RAPGEF3O95398 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF3O95398 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF3O95398 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC29.77■■■□□ 2.36
RAPGEF3O95398 AC018553.1-201ENST00000616682 1458 ntBASIC29.77■■■□□ 2.36
RAPGEF3O95398 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF3O95398 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC29.77■■■□□ 2.36
RAPGEF3O95398 CNP-204ENST00000472031 1019 ntTSL 2 BASIC29.77■■■□□ 2.36
RAPGEF3O95398 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF3O95398 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RAPGEF3O95398 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.36
RAPGEF3O95398 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 UNC93B7-201ENST00000509439 705 ntBASIC29.76■■■□□ 2.35
RAPGEF3O95398 LY6E-213ENST00000522528 606 ntTSL 3 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 KRT8P10-201ENST00000450021 1447 ntBASIC29.76■■■□□ 2.35
RAPGEF3O95398 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RAPGEF3O95398 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC29.76■■■□□ 2.35
RAPGEF3O95398 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
RAPGEF3O95398 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC29.75■■■□□ 2.35
RAPGEF3O95398 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
RAPGEF3O95398 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.75■■■□□ 2.35
RAPGEF3O95398 KRT8P45-201ENST00000414328 1447 ntBASIC29.75■■■□□ 2.35
RAPGEF3O95398 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC29.75■■■□□ 2.35
RAPGEF3O95398 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
RAPGEF3O95398 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC29.75■■■□□ 2.35
RAPGEF3O95398 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RAPGEF3O95398 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RAPGEF3O95398 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF3O95398 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF3O95398 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF3O95398 SPDYE13P-201ENST00000445314 798 ntBASIC29.74■■■□□ 2.35
RAPGEF3O95398 KRT17P6-201ENST00000453795 1220 ntBASIC29.74■■■□□ 2.35
RAPGEF3O95398 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF3O95398 ME2-208ENST00000638937 2471 ntTSL 5 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 AL121603.2-201ENST00000557373 2117 ntBASIC29.74■■■□□ 2.35
RAPGEF3O95398 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RAPGEF3O95398 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC29.74■■■□□ 2.35
RAPGEF3O95398 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC29.73■■■□□ 2.35
RAPGEF3O95398 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RAPGEF3O95398 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC29.73■■■□□ 2.35
RAPGEF3O95398 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RAPGEF3O95398 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RAPGEF3O95398 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RAPGEF3O95398 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RAPGEF3O95398 AP003041.3-201ENST00000527151 707 ntBASIC29.72■■■□□ 2.35
RAPGEF3O95398 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
RAPGEF3O95398 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
RAPGEF3O95398 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF3O95398 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC29.71■■■□□ 2.35
RAPGEF3O95398 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC29.71■■■□□ 2.35
RAPGEF3O95398 Telomerase-vert.1-201ENST00000363312 438 ntBASIC29.71■■■□□ 2.35
RAPGEF3O95398 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC29.71■■■□□ 2.35
RAPGEF3O95398 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF3O95398 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
RAPGEF3O95398 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC29.71■■■□□ 2.35
RAPGEF3O95398 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC29.7■■■□□ 2.35
RAPGEF3O95398 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC29.7■■■□□ 2.35
RAPGEF3O95398 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RAPGEF3O95398 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
RAPGEF3O95398 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
RAPGEF3O95398 MIR3652-201ENST00000579335 131 ntBASIC29.7■■■□□ 2.35
RAPGEF3O95398 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC29.7■■■□□ 2.35
RAPGEF3O95398 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC29.7■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms