Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.32■□□□□ 0.04
ZNF253O75346 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF253O75346 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF253O75346 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
ZNF253O75346 BX119927.1-201ENST00000636596 1552 ntBASIC15.32■□□□□ 0.04
ZNF253O75346 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF253O75346 DPP3P2-201ENST00000416030 1696 ntBASIC15.32■□□□□ 0.04
ZNF253O75346 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF253O75346 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF253O75346 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF253O75346 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF253O75346 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF253O75346 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF253O75346 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF253O75346 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF253O75346 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF253O75346 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF253O75346 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF253O75346 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF253O75346 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF253O75346 AL158211.5-201ENST00000623583 2518 ntBASIC15.31■□□□□ 0.04
ZNF253O75346 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF253O75346 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 YBX1P1-201ENST00000445822 960 ntBASIC15.3■□□□□ 0.04
ZNF253O75346 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ZNF253O75346 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF253O75346 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF253O75346 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF253O75346 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF253O75346 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF253O75346 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF253O75346 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.29■□□□□ 0.04
ZNF253O75346 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 AC020916.1-201ENST00000587762 1774 ntBASIC15.29■□□□□ 0.04
ZNF253O75346 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF253O75346 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 AC019069.1-201ENST00000610008 1333 ntBASIC15.29■□□□□ 0.04
ZNF253O75346 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF253O75346 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF253O75346 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms