Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNOT3O75175 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CNOT3O75175 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.06■□□□□ 0.64
CNOT3O75175 AC006557.6-201ENST00000623071 864 ntBASIC19.06■□□□□ 0.64
CNOT3O75175 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CNOT3O75175 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT3O75175 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 AP005212.1-201ENST00000581547 1997 ntBASIC19.06■□□□□ 0.64
CNOT3O75175 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT3O75175 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNOT3O75175 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CNOT3O75175 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNOT3O75175 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT3O75175 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CNOT3O75175 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CNOT3O75175 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT3O75175 KRT17P3-201ENST00000420566 1262 ntBASIC19.05■□□□□ 0.64
CNOT3O75175 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.05■□□□□ 0.64
CNOT3O75175 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 AC005829.2-201ENST00000571422 1056 ntBASIC19.05■□□□□ 0.64
CNOT3O75175 RN7SL471P-201ENST00000580476 299 ntBASIC19.05■□□□□ 0.64
CNOT3O75175 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 KRT8P36-201ENST00000489121 1440 ntBASIC19.05■□□□□ 0.64
CNOT3O75175 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNOT3O75175 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNOT3O75175 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT3O75175 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CNOT3O75175 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.04■□□□□ 0.64
CNOT3O75175 POM121L13P-201ENST00000422362 380 ntBASIC19.04■□□□□ 0.64
CNOT3O75175 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT3O75175 RPPH1-201ENST00000516869 333 ntBASIC19.04■□□□□ 0.64
CNOT3O75175 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.04■□□□□ 0.64
CNOT3O75175 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CNOT3O75175 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT3O75175 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 AIRN-201ENST00000601203 4374 ntBASIC19.03■□□□□ 0.64
CNOT3O75175 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNOT3O75175 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.03■□□□□ 0.64
CNOT3O75175 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CNOT3O75175 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 C1QBPP2-201ENST00000528754 825 ntBASIC19.03■□□□□ 0.64
CNOT3O75175 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.03■□□□□ 0.64
CNOT3O75175 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.03■□□□□ 0.64
CNOT3O75175 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.03■□□□□ 0.64
CNOT3O75175 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNOT3O75175 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CNOT3O75175 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNOT3O75175 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
CNOT3O75175 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms