Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LOC285556D6RIA3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.7■■□□□ 1.22
LOC285556D6RIA3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 KRT8P8-201ENST00000434750 1448 ntBASIC22.69■■□□□ 1.22
LOC285556D6RIA3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LOC285556D6RIA3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 AC091390.4-202ENST00000476426 537 ntBASIC22.68■■□□□ 1.22
LOC285556D6RIA3 LINC01238-205ENST00000567549 1107 ntBASIC22.68■■□□□ 1.22
LOC285556D6RIA3 AL138966.2-201ENST00000621997 464 ntBASIC22.68■■□□□ 1.22
LOC285556D6RIA3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LOC285556D6RIA3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.67■■□□□ 1.22
LOC285556D6RIA3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 AC010653.2-201ENST00000623505 997 ntBASIC22.67■■□□□ 1.22
LOC285556D6RIA3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.67■■□□□ 1.22
LOC285556D6RIA3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 CCR12P-201ENST00000446203 998 ntBASIC22.66■■□□□ 1.22
LOC285556D6RIA3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
LOC285556D6RIA3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LOC285556D6RIA3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 AL031133.1-201ENST00000406807 723 ntBASIC22.64■■□□□ 1.22
LOC285556D6RIA3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 AC008040.2-201ENST00000461049 708 ntBASIC22.64■■□□□ 1.22
LOC285556D6RIA3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.64■■□□□ 1.22
LOC285556D6RIA3 AL358472.4-201ENST00000633140 710 ntBASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms