Protein–RNA interactions for Protein: D6R901

USP17L21, Ubiquitin carboxyl-terminal hydrolase 17-like protein 21, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L21D6R901 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.37■■□□□ 1.33
USP17L21D6R901 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.37■■□□□ 1.33
USP17L21D6R901 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
USP17L21D6R901 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.36■■□□□ 1.33
USP17L21D6R901 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.36■■□□□ 1.33
USP17L21D6R901 AC073195.1-201ENST00000607241 877 ntBASIC23.36■■□□□ 1.33
USP17L21D6R901 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.36■■□□□ 1.33
USP17L21D6R901 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.36■■□□□ 1.33
USP17L21D6R901 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
USP17L21D6R901 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP17L21D6R901 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
USP17L21D6R901 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 AP001271.2-201ENST00000624018 1556 ntBASIC23.35■■□□□ 1.33
USP17L21D6R901 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.35■■□□□ 1.33
USP17L21D6R901 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.35■■□□□ 1.33
USP17L21D6R901 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.35■■□□□ 1.33
USP17L21D6R901 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.35■■□□□ 1.33
USP17L21D6R901 TSPY15P-201ENST00000457163 923 ntBASIC23.35■■□□□ 1.33
USP17L21D6R901 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.35■■□□□ 1.33
USP17L21D6R901 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.35■■□□□ 1.33
USP17L21D6R901 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.35■■□□□ 1.33
USP17L21D6R901 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.35■■□□□ 1.33
USP17L21D6R901 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.35■■□□□ 1.33
USP17L21D6R901 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.35■■□□□ 1.33
USP17L21D6R901 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
USP17L21D6R901 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP17L21D6R901 KRT17P2-201ENST00000300992 1314 ntBASIC23.34■■□□□ 1.33
USP17L21D6R901 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.34■■□□□ 1.33
USP17L21D6R901 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 TMEM179-206ENST00000616017 1645 ntBASIC23.34■■□□□ 1.33
USP17L21D6R901 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
USP17L21D6R901 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.34■■□□□ 1.33
USP17L21D6R901 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.34■■□□□ 1.33
USP17L21D6R901 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.34■■□□□ 1.33
USP17L21D6R901 C1QL1P1-201ENST00000568105 661 ntBASIC23.34■■□□□ 1.33
USP17L21D6R901 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.34■■□□□ 1.33
USP17L21D6R901 AC112907.3-201ENST00000577781 2400 ntBASIC23.34■■□□□ 1.33
USP17L21D6R901 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
USP17L21D6R901 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP17L21D6R901 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP17L21D6R901 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.33■■□□□ 1.33
USP17L21D6R901 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP17L21D6R901 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP17L21D6R901 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.33■■□□□ 1.33
USP17L21D6R901 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.33■■□□□ 1.33
USP17L21D6R901 TUBB8P6-201ENST00000436895 1288 ntBASIC23.33■■□□□ 1.33
USP17L21D6R901 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
USP17L21D6R901 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.33■■□□□ 1.33
USP17L21D6R901 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP17L21D6R901 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.33■■□□□ 1.33
USP17L21D6R901 MIR4785-201ENST00000585005 73 ntBASIC23.33■■□□□ 1.33
USP17L21D6R901 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.33■■□□□ 1.33
USP17L21D6R901 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.33■■□□□ 1.33
USP17L21D6R901 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP17L21D6R901 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.33■■□□□ 1.33
USP17L21D6R901 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP17L21D6R901 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USP17L21D6R901 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.33■■□□□ 1.32
USP17L21D6R901 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.33■■□□□ 1.32
USP17L21D6R901 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
USP17L21D6R901 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
USP17L21D6R901 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
USP17L21D6R901 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP17L21D6R901 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
USP17L21D6R901 NIFKP9-201ENST00000419265 221 ntBASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms