Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 AC131212.4-201ENST00000623606 975 ntBASIC18.93■□□□□ 0.62
CNOT1A5YKK6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 AC004870.1-201ENST00000315132 882 ntBASIC18.92■□□□□ 0.62
CNOT1A5YKK6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT1A5YKK6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 AC004980.1-204ENST00000429707 299 ntBASIC18.91■□□□□ 0.62
CNOT1A5YKK6 EMBP1-201ENST00000458200 901 ntBASIC18.91■□□□□ 0.62
CNOT1A5YKK6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT1A5YKK6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.9■□□□□ 0.62
CNOT1A5YKK6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT1A5YKK6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT1A5YKK6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT1A5YKK6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 STARP1-201ENST00000397973 869 ntBASIC18.89■□□□□ 0.61
CNOT1A5YKK6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 AC104692.2-201ENST00000603054 253 ntBASIC18.89■□□□□ 0.61
CNOT1A5YKK6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 AL732292.2-201ENST00000609649 430 ntBASIC18.89■□□□□ 0.61
CNOT1A5YKK6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT1A5YKK6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.88■□□□□ 0.61
CNOT1A5YKK6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.88■□□□□ 0.61
CNOT1A5YKK6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms