Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SSC5DA1L4H1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 KRT16P6-202ENST00000425692 1426 ntBASIC23.12■■□□□ 1.29
SSC5DA1L4H1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SSC5DA1L4H1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 AF106564.1-201ENST00000607058 2553 ntBASIC23.11■■□□□ 1.29
SSC5DA1L4H1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SSC5DA1L4H1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 AL121956.5-201ENST00000625261 221 ntBASIC23.1■■□□□ 1.29
SSC5DA1L4H1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.1■■□□□ 1.29
SSC5DA1L4H1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 AC092647.4-201ENST00000457211 535 ntBASIC23.1■■□□□ 1.29
SSC5DA1L4H1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 KRT126P-201ENST00000549467 1181 ntBASIC23.1■■□□□ 1.29
SSC5DA1L4H1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.1■■□□□ 1.29
SSC5DA1L4H1 AC011558.1-201ENST00000623459 338 ntBASIC23.1■■□□□ 1.29
SSC5DA1L4H1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.09■■□□□ 1.29
SSC5DA1L4H1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 PCED1CP-201ENST00000419887 785 ntBASIC23.08■■□□□ 1.29
SSC5DA1L4H1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 AL359075.1-203ENST00000462729 1002 ntBASIC23.08■■□□□ 1.29
SSC5DA1L4H1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.08■■□□□ 1.29
SSC5DA1L4H1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SSC5DA1L4H1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SSC5DA1L4H1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
SSC5DA1L4H1 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.08■■□□□ 1.28
SSC5DA1L4H1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.08■■□□□ 1.28
SSC5DA1L4H1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SSC5DA1L4H1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms