Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV5A0A0B4J249 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 YBX1P1-201ENST00000445822 960 ntBASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV5A0A0B4J249 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 KRT16P6-202ENST00000425692 1426 ntBASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms