Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC016583.1-201ENST00000624221 2431 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 SNORD1C-201ENST00000363315 78 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 MIR191-201ENST00000384873 92 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AL034417.1-201ENST00000399343 800 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC097359.1-201ENST00000447946 463 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 RAB28P2-201ENST00000454299 641 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SL352P-201ENST00000466002 277 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 SNX18P25-201ENST00000510539 758 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 TPM3P3-201ENST00000521343 354 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 MIR744-201ENST00000578242 98 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 MIR5010-201ENST00000582846 120 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC141002.1-201ENST00000607025 279 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SL261P-201ENST00000613441 282 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AL355974.3-201ENST00000617383 467 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC015660.5-201ENST00000623238 564 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AP001153.1-201ENST00000641024 338 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC245100.2-201ENST00000454544 1679 ntBASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RHBDD3Q9Y3P4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SKP184-201ENST00000362348 333 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AL139805.1-201ENST00000407837 289 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SKP146-201ENST00000410242 334 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 RPL7AP51-201ENST00000422016 760 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 KF459542.1-201ENST00000450908 553 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 RN7SL552P-201ENST00000462094 276 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 SNRPCP3-201ENST00000474888 476 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 TRBV5-2-201ENST00000489095 273 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 GUSBP9-201ENST00000510138 584 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC090958.1-201ENST00000511122 351 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 ZNF519P4-201ENST00000514008 125 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 Vault.2-201ENST00000516519 98 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC116917.1-201ENST00000520558 305 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AP001000.1-201ENST00000526843 742 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AC036111.2-201ENST00000533247 901 ntBASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.26□□□□□ -1.57
RHBDD3Q9Y3P4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms