Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDLIM7Q9NR12 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PDLIM7Q9NR12 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PDLIM7Q9NR12 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDLIM7Q9NR12 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
PDLIM7Q9NR12 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.27□□□□□ -1.24
PDLIM7Q9NR12 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PDLIM7Q9NR12 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.27□□□□□ -1.24
PDLIM7Q9NR12 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 MAPK10-383ENST00000642032 3390 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 MIR640-201ENST00000385086 96 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 MTCO3P4-201ENST00000419236 787 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 ZNF965P-201ENST00000432501 817 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 RPL23AP19-201ENST00000436229 369 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 MTCYBP21-201ENST00000443300 1113 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL096829.2-201ENST00000446582 742 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC097463.1-201ENST00000447288 481 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL031313.1-201ENST00000448435 256 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL139156.3-201ENST00000454802 394 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 NXT1P1-201ENST00000458481 316 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC090543.1-201ENST00000492168 485 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 RPL19P11-201ENST00000495944 589 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 OR7E99P-201ENST00000505750 922 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LINC00556-201ENST00000569603 412 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 MIR4701-201ENST00000583094 63 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 PIGPP4-201ENST00000584447 307 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AL359704.2-201ENST00000604335 521 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC092266.1-201ENST00000610958 165 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC008121.2-201ENST00000614647 523 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC129915.3-201ENST00000634128 948 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AP001153.1-201ENST00000641024 338 ntBASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.27□□□□□ -1.25
PDLIM7Q9NR12 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 MAPK10-344ENST00000641718 3746 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC091305.2-201ENST00000624049 1576 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AL157831.2-201ENST00000564681 3095 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 OR2M1P-201ENST00000318104 951 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SNORA51.9-201ENST00000384295 124 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 SNORD116-8-201ENST00000384365 95 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AC087752.1-201ENST00000391360 558 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 RN7SKP144-201ENST00000411108 279 ntBASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.26□□□□□ -1.25
PDLIM7Q9NR12 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms