Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC018737.1-201ENST00000603900 204 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AF250324.2-201ENST00000608299 610 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC015922.4-201ENST00000612568 690 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC105227.2-201ENST00000615075 605 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC139769.3-201ENST00000618383 175 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 WASF5P-205ENST00000428639 1455 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 UGT2B24P-201ENST00000514441 1597 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
SSU72Q9NP77 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 RNU6-757P-201ENST00000410334 100 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 YWHAZP5-201ENST00000419975 730 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 GTF3AP5-201ENST00000442645 697 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 RPSAP7-201ENST00000456871 885 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC236972.4-201ENST00000458091 963 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC004069.2-201ENST00000505438 1114 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 OR7E163P-201ENST00000505943 894 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC104090.1-201ENST00000506341 1171 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AF186996.3-201ENST00000509527 964 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC011352.2-201ENST00000514574 1016 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 IGLV10-67-201ENST00000519446 325 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 EEF1B2P4-201ENST00000551398 348 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SERPINE4P-201ENST00000554978 281 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AADACP1-206ENST00000561502 1193 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC067852.5-201ENST00000589299 310 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 WISP1-OT1-201ENST00000602893 642 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC090181.2-201ENST00000602975 672 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 MTCYBP22-201ENST00000603788 447 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AP000436.1-201ENST00000605239 800 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC100793.4-201ENST00000613683 429 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AP003068.4-201ENST00000623192 802 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC016582.3-206ENST00000636547 207 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AC017007.4-201ENST00000503353 1352 ntBASIC7.02□□□□□ -1.29
SSU72Q9NP77 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SSU72Q9NP77 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSU72Q9NP77 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 MTND4P31-201ENST00000425607 1343 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC013488.1-201ENST00000526618 1838 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms