Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNA5SP110-201ENST00000362638 115 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 GCNT1P4-201ENST00000404096 329 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 SETP9-201ENST00000423837 832 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC130360.1-201ENST00000425489 1117 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 SUMO2P8-201ENST00000434672 286 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC002553.3-201ENST00000453002 341 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 SDC4P-201ENST00000453285 601 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC118758.1-202ENST00000454719 225 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC104339.1-201ENST00000465478 348 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 OR7E99P-201ENST00000505750 922 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 ACTR6P1-201ENST00000514311 1104 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 RN7SKP288-201ENST00000516227 268 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC130365.2-201ENST00000525882 1201 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 EIF1AXP2-201ENST00000555940 413 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 MIR4502-201ENST00000580432 81 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AP001357.1-201ENST00000586304 1053 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC006115.2-201ENST00000596823 202 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC107905.1-201ENST00000616204 426 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AP003400.6-201ENST00000624698 740 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC120036.2-201ENST00000509729 1474 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AL591135.1-201ENST00000401578 5914 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC130304.1-201ENST00000622942 2385 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 MIPEPP2-201ENST00000422560 1819 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 OR10R3P-201ENST00000361688 942 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 RN7SKP17-201ENST00000411242 351 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 CASKP1-201ENST00000412870 582 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 RPSAP40-201ENST00000442343 891 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 OR52I1-201ENST00000450052 1050 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 FCF1P7-201ENST00000451185 558 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 PPIAP7-201ENST00000454070 489 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC122718.2-201ENST00000505325 591 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 CR383658.1-201ENST00000514609 734 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 HSD3BP3-201ENST00000514706 994 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC087272.1-201ENST00000523624 533 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AP000620.1-201ENST00000527147 504 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC124916.2-201ENST00000604416 224 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC015849.6-201ENST00000605454 474 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms