Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AL163193.1-201ENST00000444895 788 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 VN1R38P-201ENST00000450265 887 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 SBDSP1-204ENST00000453858 737 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 SUMO2P7-201ENST00000511179 285 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 SETP12-201ENST00000514068 805 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 SEC11B-201ENST00000518383 499 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC092865.1-201ENST00000544395 1023 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AL136520.1-202ENST00000555494 763 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC233702.7-202ENST00000582941 211 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC104695.2-201ENST00000605056 775 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 Z93929.1-201ENST00000418200 1475 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC092111.1-201ENST00000618256 3358 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC114876.1-201ENST00000490962 1366 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 UGT2B27P-201ENST00000505092 1620 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 SNORA64.1-201ENST00000362600 132 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 RPL34P3-201ENST00000421454 338 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 ARL5AP3-201ENST00000439327 386 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC092967.1-201ENST00000449016 481 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC023245.1-201ENST00000468501 517 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC008410.1-201ENST00000483777 339 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC008628.1-201ENST00000508663 265 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC002456.2-201ENST00000509356 380 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 SNORA70.20-201ENST00000516848 126 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 IGKV2-18-201ENST00000522607 343 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 RPA2P3-201ENST00000533268 770 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC090079.2-201ENST00000575289 768 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AP001496.3-201ENST00000580230 913 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AP000864.1-201ENST00000609424 650 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC012254.5-201ENST00000623573 478 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 ICE2P1-201ENST00000512800 1849 ntBASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RTFDC1Q9BY42 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 AC110373.1-201ENST00000505994 3505 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 SPATA31C1-201ENST00000420021 3895 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 RNU105B-201ENST00000364478 208 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 RNA5SP478-201ENST00000364657 115 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 RNU11-6P-201ENST00000391127 133 ntBASIC7.44□□□□□ -1.22
RTFDC1Q9BY42 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms