Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 FAR2P1-206ENST00000449736 709 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AL450023.1-201ENST00000450868 751 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 RPL15P21-201ENST00000495592 567 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 RBM22P12-201ENST00000567098 1255 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 MIR4260-201ENST00000583107 67 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AC022905.1-201ENST00000503430 3048 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 AC012213.2-201ENST00000562917 4597 ntBASIC8.84□□□□□ -0.99
SCAPERQ9BY12 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
SCAPERQ9BY12 CASC19-243ENST00000641588 1546 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.83□□□□□ -1
SCAPERQ9BY12 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.83□□□□□ -1
SCAPERQ9BY12 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.83□□□□□ -1
SCAPERQ9BY12 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.83□□□□□ -1
SCAPERQ9BY12 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.83□□□□□ -1
SCAPERQ9BY12 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 U3.2-201ENST00000362981 210 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 RN7SKP213-201ENST00000410746 298 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 RPL7L1P9-201ENST00000431298 745 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.83□□□□□ -1
SCAPERQ9BY12 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 LDHBP2-201ENST00000456969 1005 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.83□□□□□ -1
SCAPERQ9BY12 RPS21P4-201ENST00000487122 248 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.83□□□□□ -1
SCAPERQ9BY12 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.83□□□□□ -1
SCAPERQ9BY12 AC063977.5-201ENST00000601044 974 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 AC073342.3-201ENST00000624211 193 ntBASIC8.83□□□□□ -1
SCAPERQ9BY12 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SCAPERQ9BY12 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.83□□□□□ -1
SCAPERQ9BY12 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.83□□□□□ -1
SCAPERQ9BY12 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SCAPERQ9BY12 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.83□□□□□ -1
SCAPERQ9BY12 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
SCAPERQ9BY12 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.82□□□□□ -1
SCAPERQ9BY12 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.82□□□□□ -1
SCAPERQ9BY12 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.82□□□□□ -1
SCAPERQ9BY12 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.82□□□□□ -1
SCAPERQ9BY12 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 RMRPP5-201ENST00000411156 267 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.82□□□□□ -1
SCAPERQ9BY12 AC005033.1-201ENST00000428904 813 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 OR52B5P-201ENST00000435337 951 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 FABP5P2-201ENST00000439042 408 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC019185.1-201ENST00000442718 389 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AL450996.1-201ENST00000445574 1202 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 RPL7P61-201ENST00000451721 751 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC112187.1-201ENST00000455837 479 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC068522.1-201ENST00000482895 345 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC8.82□□□□□ -1
SCAPERQ9BY12 AC105420.1-201ENST00000504389 582 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC139365.2-201ENST00000517972 253 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.82□□□□□ -1
SCAPERQ9BY12 OR4A42P-201ENST00000531397 938 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.82□□□□□ -1
SCAPERQ9BY12 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.82□□□□□ -1
SCAPERQ9BY12 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.82□□□□□ -1
SCAPERQ9BY12 AL121612.2-201ENST00000612261 482 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AL390318.1-201ENST00000624564 687 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 OR52B5P-202ENST00000641118 1110 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 LINC01963-201ENST00000562038 3148 ntBASIC8.82□□□□□ -1
SCAPERQ9BY12 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.82□□□□□ -1
SCAPERQ9BY12 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCAPERQ9BY12 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.81□□□□□ -1
SCAPERQ9BY12 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCAPERQ9BY12 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.81□□□□□ -1
SCAPERQ9BY12 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.81□□□□□ -1
SCAPERQ9BY12 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.81□□□□□ -1
SCAPERQ9BY12 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.81□□□□□ -1
SCAPERQ9BY12 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.81□□□□□ -1
SCAPERQ9BY12 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms