Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AL590399.4-201ENST00000436561 601 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC023245.1-201ENST00000468501 517 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 PDCL3P4-201ENST00000489621 720 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 GARSP1-201ENST00000570895 719 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AL499605.1-201ENST00000604628 403 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AL133481.2-203ENST00000607558 139 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AC018690.1-201ENST00000608144 626 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 AL021918.2-201ENST00000613415 194 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 WDR95P-201ENST00000425638 1542 ntBASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 MTCO1P28-201ENST00000574177 1528 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 RNU1-65P-201ENST00000363919 148 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 BMS1P10-201ENST00000443754 1120 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC083795.1-201ENST00000491760 320 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AP002453.1-201ENST00000492327 668 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC009879.1-201ENST00000520029 839 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 OR5D2P-201ENST00000524390 911 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AL121594.2-201ENST00000541658 472 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 MIR3154-201ENST00000577829 84 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 SETP3-201ENST00000581726 813 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 MIR4420-201ENST00000583944 77 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC097641.3-201ENST00000613523 464 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC096708.4-201ENST00000620563 552 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AL683826.1-201ENST00000624104 627 ntBASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.4□□□□□ -1.54
RSPO3Q9BXY4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RSPO3Q9BXY4 AC232271.1-201ENST00000602455 2715 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms