Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC010132.2-201ENST00000295493 1043 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 BX322650.1-201ENST00000332359 2143 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MIR138-2-201ENST00000384916 84 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 TPTE2P2-201ENST00000403471 1466 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 NEPNP-201ENST00000404786 1371 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 RN7SKP268-201ENST00000411107 316 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AF274854.1-201ENST00000413236 615 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 GAPDHP69-201ENST00000425504 1008 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 NPM1P49-201ENST00000448027 714 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AURKAPS1-201ENST00000451805 1212 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC097262.1-201ENST00000452559 548 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 ST13P21-201ENST00000453250 1098 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 OR7E7P-201ENST00000455678 1012 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 EIF3LP2-201ENST00000457262 807 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 TREML3P-201ENST00000457327 501 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 GAPDHP53-201ENST00000458397 924 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC018639.1-201ENST00000492994 442 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC008565.1-201ENST00000509046 885 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC116353.3-201ENST00000511215 249 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC114940.1-201ENST00000512162 1265 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 RN7SKP141-201ENST00000516167 338 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MIR4800-201ENST00000537353 80 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 ELOCP32-201ENST00000548625 324 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC010546.1-201ENST00000569391 485 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MTATP6P3-201ENST00000581686 676 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC090616.2-202ENST00000584248 222 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AL031985.2-201ENST00000600955 480 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC104446.1-201ENST00000613728 1321 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC122133.1-201ENST00000613964 233 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 RN7SL126P-201ENST00000616400 299 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC092111.1-201ENST00000618256 3358 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AC025262.3-201ENST00000623666 360 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AL021877.2-201ENST00000624442 10684 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PTCHD1Q96NR3 AL512310.3-201ENST00000547023 1335 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms