Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ZNF101P1-201ENST00000435701 1720 ntBASIC9.55□□□□□ -0.88
TOPBP1Q92547 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ZNF733P-202ENST00000444809 1573 ntBASIC9.55□□□□□ -0.88
TOPBP1Q92547 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 MRRF-207ENST00000373729 870 ntTSL 3 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 RNU6ATAC7P-201ENST00000408111 127 ntBASIC9.55□□□□□ -0.88
TOPBP1Q92547 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 RNU6-941P-201ENST00000516346 108 ntBASIC9.55□□□□□ -0.88
TOPBP1Q92547 AC004890.3-201ENST00000605566 1095 ntBASIC9.55□□□□□ -0.88
TOPBP1Q92547 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TOPBP1Q92547 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.55□□□□□ -0.88
TOPBP1Q92547 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 AP003119.3-201ENST00000566747 4192 ntBASIC9.54□□□□□ -0.88
TOPBP1Q92547 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 AL603882.1-201ENST00000463059 681 ntBASIC9.54□□□□□ -0.88
TOPBP1Q92547 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 AC011493.1-201ENST00000596753 1632 ntBASIC9.54□□□□□ -0.88
TOPBP1Q92547 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOPBP1Q92547 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
TOPBP1Q92547 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 AC013442.1-201ENST00000397347 228 ntBASIC9.53□□□□□ -0.88
TOPBP1Q92547 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 MIR4311-201ENST00000580794 100 ntBASIC9.53□□□□□ -0.88
TOPBP1Q92547 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
TOPBP1Q92547 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOPBP1Q92547 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
TOPBP1Q92547 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
TOPBP1Q92547 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
TOPBP1Q92547 RNU4-4P-201ENST00000364588 130 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
TOPBP1Q92547 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 SRSF1P1-201ENST00000424058 520 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 AL451136.1-201ENST00000435399 325 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 AC006466.1-201ENST00000438721 289 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 RPS29P33-201ENST00000456717 146 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 CYP4F27P-201ENST00000514557 494 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 MAL2-207ENST00000522828 603 ntTSL 3 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.52□□□□□ -0.88
TOPBP1Q92547 AC069307.1-201ENST00000602820 447 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 IGLCOR22-2-201ENST00000605398 313 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 AC109583.2-201ENST00000617367 129 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 AC087385.3-201ENST00000620477 187 ntBASIC9.52□□□□□ -0.88
TOPBP1Q92547 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms