Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MIR188-201ENST00000385034 86 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 NPM1P37-201ENST00000403105 874 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 SNRPEP6-201ENST00000407465 277 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC073410.1-201ENST00000435125 589 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 OR52I1-201ENST00000450052 1050 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 SEPT7P3-201ENST00000455017 621 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC091544.1-201ENST00000484702 348 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 GUSBP9-201ENST00000510138 584 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 CR383658.1-201ENST00000514609 734 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MRPS21P8-201ENST00000569196 235 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 WBP1LP11-201ENST00000586141 328 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AL645933.2-201ENST00000606743 1207 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC132825.8-201ENST00000640783 297 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC010325.3-201ENST00000641084 394 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 AC232271.1-201ENST00000602455 2715 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 THAP12P9-201ENST00000503971 2360 ntBASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.71□□□□□ -1.5
CLHC1Q8NHS4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RPS2P45-201ENST00000469997 2057 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC026523.2-201ENST00000625039 7739 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 SNORA21-201ENST00000362423 132 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL139805.1-201ENST00000407837 289 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 MYL6P5-201ENST00000412707 459 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC245096.1-201ENST00000413104 546 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RPL7AP51-201ENST00000422016 760 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RPSAP32-201ENST00000432681 526 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC064862.5-201ENST00000440618 334 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 SEPT14P12-201ENST00000442280 560 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC002553.3-201ENST00000453002 341 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC104164.1-201ENST00000460282 590 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RPL29P23-201ENST00000486188 442 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 NACAP5-201ENST00000509863 636 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 MRPS5P3-201ENST00000515577 166 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RNA5SP441-201ENST00000516809 88 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL135999.3-201ENST00000610501 812 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL080312.2-201ENST00000613001 630 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AC096861.1-201ENST00000616652 240 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AL512652.1-201ENST00000619006 500 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLHC1Q8NHS4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms