Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 MTND4P21-201ENST00000453886 1357 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 RNA5SP485-201ENST00000365053 119 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 TRAV35-201ENST00000390462 330 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 RN7SKP121-201ENST00000410842 305 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL354707.3-201ENST00000427308 331 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC112492.2-201ENST00000432774 1030 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 EMC3-AS1-205ENST00000438698 534 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC092601.1-201ENST00000444526 383 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL133351.3-201ENST00000454998 193 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 RPS4XP17-201ENST00000479057 754 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 RN7SL284P-201ENST00000498823 275 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 OR4D12P-201ENST00000509361 911 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 SNORA70.11-201ENST00000515987 138 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 RNU2-45P-201ENST00000516068 187 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 SNORA70.13-201ENST00000516116 138 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 OR4R2P-201ENST00000530815 597 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AP001858.2-201ENST00000536213 601 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC009268.1-201ENST00000561352 1203 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC025283.1-201ENST00000572039 734 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC126365.2-201ENST00000580630 379 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 WBP1LP11-201ENST00000586141 328 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AP001357.1-201ENST00000586304 1053 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC063977.7-201ENST00000594454 337 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC098483.2-201ENST00000603158 454 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 RPAP2P1-201ENST00000603626 1168 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL139022.2-201ENST00000606934 443 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AL591167.1-201ENST00000607321 456 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC015802.5-201ENST00000607478 399 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 GAPDHP41-201ENST00000613707 975 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 WBP1LP8-201ENST00000617401 327 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC020763.5-201ENST00000623298 430 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 AC027279.1-201ENST00000568885 4284 ntBASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP4Q8N3C7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.71□□□□□ -1.49
CLIP4Q8N3C7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLIP4Q8N3C7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLIP4Q8N3C7 ADAM24P-201ENST00000398655 2101 ntBASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 CASC19-246ENST00000641625 1606 ntBASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 RNU1-49P-201ENST00000363468 159 ntBASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 AL121835.1-201ENST00000404250 354 ntBASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 AL360013.1-201ENST00000419031 858 ntBASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 OSTCP4-201ENST00000424397 449 ntBASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP4Q8N3C7 ZFAND6P1-201ENST00000434138 605 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms