Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL158068.1-201ENST00000506116 616 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 TOMM22P4-201ENST00000511318 336 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 IGKV2-19-201ENST00000518132 283 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 OR7E158P-201ENST00000524483 910 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 BCAS2P1-201ENST00000528022 632 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC084121.1-201ENST00000533882 835 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AL845552.1-201ENST00000556820 323 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC092266.1-201ENST00000610958 165 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AL355974.3-201ENST00000617383 467 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC241377.1-201ENST00000619797 406 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AL683826.1-201ENST00000624104 627 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 SNX18P12-201ENST00000624821 759 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC130304.1-201ENST00000622942 2385 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC104966.1-201ENST00000467010 1464 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 MIR130B-202ENST00000385018 82 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AL121977.1-201ENST00000401636 979 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 RPL35AP3-201ENST00000414680 288 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 RPS7P3-201ENST00000443360 580 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AL603882.1-201ENST00000463059 681 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC104339.1-201ENST00000465478 348 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PFN1P6-201ENST00000476786 399 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 IGKV3D-25-201ENST00000519599 235 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC007346.2-201ENST00000564816 892 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC016839.1-201ENST00000578162 867 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AP005119.1-201ENST00000580956 292 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AL591926.1-201ENST00000620542 217 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC096708.4-201ENST00000620563 552 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AC005224.3-201ENST00000584683 2140 ntBASIC6.61□□□□□ -1.35
CCDC65Q8IXS2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 U3.23-201ENST00000391132 200 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AL445928.1-201ENST00000435545 222 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AC002310.3-201ENST00000569728 723 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AC091167.5-201ENST00000605689 894 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AP001437.1-201ENST00000608783 456 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 AL445670.1-201ENST00000618889 801 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms